* CPV: sci-geosciences/gmt-4.5.0-r2 * REPO: gentoo * Maintainer: sci-geosciences@gentoo.org * USE: elibc_glibc kernel_linux test userland_GNU x86 >>> Unpacking source... >>> Unpacking GMT4.5.0_src.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>> Unpacking GMT4.5.0_share.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>> Unpacking GSHHS2.0_coast.tar.bz2 to /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work * Applying gmt-4.5.0-no-strip.patch ... [ ok ] >>> Source unpacked in /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work >>> Compiling source in /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0 ... * econf: updating GMT4.5.0/config.sub with /usr/share/gnuconfig/config.sub * econf: updating GMT4.5.0/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib/gmt-4.5.0 --includedir=/usr/include/gmt-4.5.0 --datadir=/usr/share/gmt-4.5.0 configure: loading site script /usr/share/config.site configure: loading site script /usr/share/crossdev/include/site/linux checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking target system type... i686-pc-linux-gnu checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether i686-pc-linux-gnu-gcc accepts -g... yes checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for less... /usr/bin/less checking for ar... ar checking for csh... csh checking for ld... ld checking for as... as checking whether ln -s works... yes checking for a BSD-compatible install... /usr/bin/install -c checking for gawk... gawk checking for i686-pc-linux-gnu-ranlib... i686-pc-linux-gnu-ranlib checking for an ANSI C-conforming const... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for uid_t in sys/types.h... yes checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for int16_t... yes checking for int32_t... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uint16_t... yes checking for uint32_t... yes checking for ptrdiff_t... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking termios.h usability... yes checking termios.h presence... yes checking for termios.h... yes checking for library containing sin... -lm checking for library containing sincos... none required checking for a broken sincos function... no checking for unistd.h... (cached) yes checking for working chown... yes checking whether closedir returns void... no checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for copysign... yes checking for log1p... yes checking for hypot... yes checking for acosh... yes checking for asinh... yes checking for atanh... yes checking for rint... yes checking for irint... no checking for isnanf... yes checking for isnand... no checking for isnan... yes checking for j0... yes checking for j1... yes checking for jn... yes checking for y0... yes checking for y1... yes checking for yn... yes checking for erf... yes checking for erfc... yes checking for strdup... yes checking for strtod... (cached) yes checking for floor... yes checking for getcwd... yes checking for gettimeofday... yes checking for memset... yes checking for modf... yes checking for pow... yes checking for rint... (cached) yes checking for sqrt... yes checking for strchr... yes checking for strdup... (cached) yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for hypot... (cached) yes checking whether byte ordering is bigendian... no checking for GMT manpage preprocessor... /usr/bin/cpp -w -P -nostdinc checking for GMT ftp site selection... ftp.soest.hawaii.edu checking for Octave or Matlab directory... none... mex compilation disabled Octave/Matlab mex supplement will be skipped checking for ncdump... /usr/bin/ncdump checking for netCDF include directory... /usr/include checking for netCDF library directory... /usr/lib checking for file locking... yes checking for 64-bit compiling... no checking for universal binaries... no checking if OK to compile mex... not available checking if OK to compile xgrid... not available checking if we should compile with debugging switch -g... no checking if the triangulation by Shewchuk should be used... no checking linker options... -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,$(NETCDF_LIB) checking compiler options for GMT... -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing checking compiler preprocessor flags for GMT... checking if CPPFLAGS need to be added to CFLAGS... no checking for default GMT units... SI (cm) checking for default PostScript format... PS configure: creating ./config.status config.status: creating src/makegmt.macros config.status: creating src/GMT config.status: creating src/gmt_version.h config.status: creating src/isogmt config.status: creating share/conf/gmt.conf config.status: creating share/conf/gmtdefaults_SI config.status: creating share/conf/gmtdefaults_US config.status: creating src/gmt_notposix.h make -j14 gmt cd src ; make all make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pslib.o pslib.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_bcr.o gmt_bcr.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_calclock.o gmt_calclock.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_cdf.o gmt_cdf.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_customio.o gmt_customio.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_grdio.o gmt_grdio.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_init.o gmt_init.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_io.o gmt_io.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_map.o gmt_map.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_nc.o gmt_nc.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_proj.o gmt_proj.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_shore.o gmt_shore.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_stat.o gmt_stat.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_support.o gmt_support.c gmt_io.c: In function ‘GMT_import_table’: gmt_io.c:2875:14: warning: ISO C forbids initialization between function pointer and ‘void *’ gmt_io.c: In function ‘GMT_export_table’: gmt_io.c:3100:14: warning: ISO C forbids initialization between function pointer and ‘void *’ i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_vector.o gmt_vector.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt_plot.o gmt_plot.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmean.o blockmean.c gmt_plot.c: In function ‘GMT_map_annotate’: gmt_plot.c:1808:25: warning: ISO C forbids initialization between function pointer and ‘void *’ i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmedian.o blockmedian.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o blockmode.o blockmode.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o filter1d.o filter1d.c In file included from /usr/include/string.h:642:0, from gmt.h:77, from gmt_customio.c:63: In function ‘strcpy’, inlined from ‘GMT_srf_write_grd’ at gmt_customio.c:1693:9: /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o fitcircle.o fitcircle.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtconvert.o gmtconvert.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtdefaults.o gmtdefaults.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtmath.o gmtmath.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtselect.o gmtselect.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmtset.o gmtset.c In function ‘strcpy’, inlined from ‘GMT_srf_write_grd_info’ at gmt_customio.c:1464:9: /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grd2cpt.o grd2cpt.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grd2xyz.o grd2xyz.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdblend.o grdblend.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdcut.o grdcut.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdclip.o grdclip.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdedit.o grdedit.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdfft.o grdfft.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdfilter.o grdfilter.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdgradient.o grdgradient.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdhisteq.o grdhisteq.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdinfo.o grdinfo.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdlandmask.o grdlandmask.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdmask.o grdmask.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdtrack.o grdtrack.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdreformat.o grdreformat.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdmath.o grdmath.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdpaste.o grdpaste.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdproject.o grdproject.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdsample.o grdsample.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdtrend.o grdtrend.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdvolume.o grdvolume.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o greenspline.o greenspline.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o makecpt.o makecpt.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o mapproject.o mapproject.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o minmax.o minmax.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o nearneighbor.o nearneighbor.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o project.o project.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o ps2raster.o ps2raster.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o sample1d.o sample1d.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o spectrum1d.o spectrum1d.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o splitxyz.o splitxyz.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o surface.o surface.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o trend1d.o trend1d.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o trend2d.o trend2d.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o triangulate.o triangulate.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o xyz2grd.o xyz2grd.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o gmt2rgb.o gmt2rgb.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdcontour.o grdcontour.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdimage.o grdimage.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdvector.o grdvector.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o grdview.o grdview.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psbasemap.o psbasemap.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psclip.o psclip.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pscoast.o pscoast.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pscontour.o pscontour.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pshistogram.o pshistogram.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psimage.o psimage.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pslegend.o pslegend.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psmask.o psmask.c In file included from /usr/include/string.h:642:0, from gmt.h:77, from psimage.c:27: In function ‘strcpy’, inlined from ‘New_Psimage_Ctrl’ at psimage.c:357:9: /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer In function ‘strcpy’, inlined from ‘main’ at psimage.c:124:25: /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psrose.o psrose.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psscale.o psscale.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pstext.o pstext.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o pswiggle.o pswiggle.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psxy.o psxy.c i686-pc-linux-gnu-gcc -O2 -pipe -pedantic -Wall -fPIC -fno-strict-aliasing -I/usr/include -DGMT_SHARE_PATH=\"/usr/share/gmt-4.5.0\" -c -o psxyz.o psxyz.c ar cvur libpsl.a pslib.o a - pslib.o i686-pc-linux-gnu-ranlib libpsl.a ar cvur libgmtps.a gmt_plot.o a - gmt_plot.o i686-pc-linux-gnu-ranlib libgmtps.a ar cvur libgmt.a gmt_bcr.o gmt_calclock.o gmt_cdf.o gmt_customio.o gmt_grdio.o gmt_init.o gmt_io.o gmt_map.o gmt_nc.o gmt_proj.o gmt_shore.o gmt_stat.o gmt_support.o gmt_vector.o a - gmt_bcr.o a - gmt_calclock.o a - gmt_cdf.o a - gmt_customio.o a - gmt_grdio.o a - gmt_init.o a - gmt_io.o a - gmt_map.o a - gmt_nc.o a - gmt_proj.o a - gmt_shore.o a - gmt_stat.o a - gmt_support.o a - gmt_vector.o i686-pc-linux-gnu-ranlib libgmt.a i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmean.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmean i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmedian.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmedian i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib blockmode.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o blockmode i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib filter1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o filter1d i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib fitcircle.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o fitcircle i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtconvert.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtconvert i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtdefaults.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtdefaults i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtmath.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtmath i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtselect.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtselect i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmtset.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o gmtset i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grd2cpt.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grd2cpt i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grd2xyz.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grd2xyz i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdblend.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdblend i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdcut.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdcut i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdclip.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdclip i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdedit.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdedit i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdfft.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdfft i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdfilter.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdfilter i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdgradient.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdgradient i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdhisteq.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdhisteq i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdinfo.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdinfo i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdlandmask.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdlandmask i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdmask.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdmask i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdtrack.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdtrack i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdreformat.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdreformat i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdmath.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdmath i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdpaste.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdpaste i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdproject.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdproject i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdsample.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdsample i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdtrend.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdtrend i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdvolume.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o grdvolume i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib greenspline.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o greenspline i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib makecpt.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o makecpt i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib mapproject.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o mapproject i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib minmax.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o minmax i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib nearneighbor.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o nearneighbor i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib project.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o project i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib ps2raster.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o ps2raster i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib sample1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o sample1d i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib spectrum1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o spectrum1d i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib splitxyz.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o splitxyz i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib surface.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o surface i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib trend1d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o trend1d i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib trend2d.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o trend2d i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib triangulate.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o triangulate i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib xyz2grd.o -L. -lgmt -L/usr/lib -lnetcdf -lm -o xyz2grd i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib gmt2rgb.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o gmt2rgb i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdcontour.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdcontour i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdimage.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdimage i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdvector.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdvector i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib grdview.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o grdview i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psbasemap.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psbasemap i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psclip.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psclip i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pscoast.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pscoast i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pscontour.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pscontour i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pshistogram.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pshistogram i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psimage.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psimage i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pslegend.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pslegend i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psmask.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psmask i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psrose.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psrose i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psscale.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psscale i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pstext.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pstext i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib pswiggle.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o pswiggle i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psxy.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psxy i686-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,-rpath,/usr/lib psxyz.o -L. -lgmt -lgmtps -lpsl -L/usr/lib -lnetcdf -lm -o psxyz make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' >>> Source compiled. >>> Test phase [none]: sci-geosciences/gmt-4.5.0-r2 >>> Install gmt-4.5.0-r2 into /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/ category sci-geosciences make -j14 -j1 prefix=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr datadir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share infodir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/info localstatedir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/var/lib mandir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man sysconfdir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/etc -j14 -j1 includedir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 libdir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 datadir=/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/share/gmt-4.5.0 install install-data install-man install cd src ; make install make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/bin /usr/bin/install -c GMT gmt_shell_functions.sh gmtget gmtlogo isogmt psbbox.sh blockmean blockmedian blockmode filter1d fitcircle gmtconvert gmtdefaults gmtmath gmtselect gmtset grd2cpt grd2xyz grdblend grdcut grdclip grdedit grdfft grdfilter grdgradient grdhisteq grdinfo grdlandmask grdmask grdtrack grdreformat grdmath grdpaste grdproject grdsample grdtrend grdvolume greenspline makecpt mapproject minmax nearneighbor project ps2raster sample1d spectrum1d splitxyz surface trend1d trend2d triangulate xyz2grd gmt2rgb grdcontour grdimage grdvector grdview psbasemap psclip pscoast pscontour pshistogram psimage pslegend psmask psrose psscale pstext pswiggle psxy psxyz /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/bin if [ ! /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 = /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src ]; then \ /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 ; \ /usr/bin/install -c -m 644 libpsl.a libgmt.a libgmtps.a /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0; \ if [ ! a = a ]; then /usr/bin/install -c -m 755 libpsl.a libgmt.a libgmtps.a /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0; fi \ fi if [ ! /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 = /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src ]; then \ /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0 ; \ /usr/bin/install -c -m 644 gmt.h gmt_bcr.h gmt_boundcond.h gmt_calclock.h gmt_colors.h gmt_common.h gmt_contour.h gmt_customio.h gmt_dimensions.h gmt_error.h gmt_grd.h gmt_grdio.h gmt_init.h gmt_io.h gmt_map.h gmt_math.h gmt_mgg_header2.h gmt_nan.h gmt_notposix.h gmt_notunix.h gmt_plot.h gmt_project.h gmt_shore.h gmt_stat.h gmt_support.h gmt_symbol.h gmt_synopsis.h gmt_vector.h gmt_version.h pslib.h /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/include/gmt-4.5.0; \ fi if [ a != a ] && [ so != so ]; then \ cd /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image//usr/lib/gmt-4.5.0 ; \ \mv -f libpsl.so libpsl.so; \ ln -s libpsl.so libpsl.so; \ \mv -f libgmt.so libgmt.so; \ ln -s libgmt.so libgmt.so; \ \mv -f libgmtps.so libgmtps.so; \ ln -s libgmtps.so libgmtps.so; \ fi make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' cd src ; make libs make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' make[1]: Nothing to be done for `libs'. make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' make TARGET=install dbase gshhs imgsrc meca mgd77 mgg misc segyprogs sph spotter x2sys x_system make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' cd src ; make install-man make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' /usr/bin/install -c -d /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man1 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man3 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man5 /usr/bin/install -c -m 644 GMT.1 gmt_shell_functions.1 gmtget.1 gmtlogo.1 isogmt.1 psbbox.1 blockmean.1 blockmedian.1 blockmode.1 filter1d.1 fitcircle.1 gmtconvert.1 gmtdefaults.1 gmtmath.1 gmtselect.1 gmtset.1 grd2cpt.1 grd2xyz.1 grdblend.1 grdcut.1 grdclip.1 grdedit.1 grdfft.1 grdfilter.1 grdgradient.1 grdhisteq.1 grdinfo.1 grdlandmask.1 grdmask.1 grdtrack.1 grdreformat.1 grdmath.1 grdpaste.1 grdproject.1 grdsample.1 grdtrend.1 grdvolume.1 greenspline.1 makecpt.1 mapproject.1 minmax.1 nearneighbor.1 project.1 ps2raster.1 sample1d.1 spectrum1d.1 splitxyz.1 surface.1 trend1d.1 trend2d.1 triangulate.1 xyz2grd.1 gmt2rgb.1 grdcontour.1 grdimage.1 grdvector.1 grdview.1 psbasemap.1 psclip.1 pscoast.1 pscontour.1 pshistogram.1 psimage.1 pslegend.1 psmask.1 psrose.1 psscale.1 pstext.1 pswiggle.1 psxy.1 psxyz.1 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man1 /usr/bin/install -c -m 644 pslib.3 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man3 /usr/bin/install -c -m 644 gmtcolors.5 /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/usr/share/man/man5 make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/src' make TARGET=install-man dbase gshhs imgsrc meca mgd77 mgg misc segyprogs sph spotter x2sys x_system make[1]: Entering directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' make[1]: Leaving directory `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0' make: Nothing to be done for `install'. cp: cannot stat `/var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/work/GMT4.5.0/{examples,tutorial}': No such file or directory >>> Completed installing gmt-4.5.0-r2 into /var/tmp/portage/sci-geosciences/gmt-4.5.0-r2/image/ strip: i686-pc-linux-gnu-strip --strip-unneeded -R .comment usr/bin/greenspline usr/bin/grdtrack usr/bin/pswiggle usr/bin/pslegend usr/bin/grdsample usr/bin/pshistogram usr/bin/grdimage usr/bin/sample1d usr/bin/triangulate usr/bin/psbasemap usr/bin/grdview usr/bin/grdvector usr/bin/blockmode usr/bin/grdcut usr/bin/surface usr/bin/grdfft usr/bin/grdblend usr/bin/grd2cpt usr/bin/grdproject usr/bin/grdmath usr/bin/psxyz usr/bin/psmask usr/bin/blockmedian usr/bin/gmtmath usr/bin/grdgradient usr/bin/pscoast usr/bin/gmtset usr/bin/grdinfo usr/bin/blockmean usr/bin/grdedit usr/bin/spectrum1d usr/bin/xyz2grd usr/bin/psimage usr/bin/fitcircle usr/bin/mapproject usr/bin/psscale usr/bin/filter1d usr/bin/grdmask usr/bin/pscontour usr/bin/psclip usr/bin/trend1d usr/bin/grdfilter usr/bin/psrose usr/bin/psxy usr/bin/gmtconvert usr/bin/grdreformat usr/bin/gmt2rgb usr/bin/ps2raster usr/bin/grdcontour usr/bin/grdhisteq usr/bin/grdvolume usr/bin/grdpaste usr/bin/grdtrend usr/bin/grd2xyz usr/bin/project usr/bin/pstext usr/bin/gmtdefaults usr/bin/nearneighbor usr/bin/minmax usr/bin/splitxyz usr/bin/gmtselect usr/bin/trend2d usr/bin/grdlandmask usr/bin/grdclip usr/bin/makecpt usr/lib/gmt-4.5.0/libgmt.a usr/lib/gmt-4.5.0/libpsl.a usr/lib/gmt-4.5.0/libgmtps.a * QA Notice: Package has poor programming practices which may compile * fine but exhibit random runtime failures. * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer * /usr/include/bits/string3.h:107:3: warning: call to __builtin___strcpy_chk will always overflow destination buffer * Please do not file a Gentoo bug and instead report the above QA * issues directly to the upstream developers of this software. * Homepage: http://gmt.soest.hawaii.edu/ * This package will overwrite one or more files that may belong to other * packages (see list below). You can use a command such as `portageq * owners / ` to identify the installed package that owns a * file. If portageq reports that only one package owns a file then do * NOT file a bug report. A bug report is only useful if it identifies at * least two or more packages that are known to install the same file(s). * If a collision occurs and you can not explain where the file came from * then you should simply ignore the collision since there is not enough * information to determine if a real problem exists. Please do NOT file * a bug report at http://bugs.gentoo.org unless you report exactly which * two packages install the same file(s). Once again, please do NOT file * a bug report unless you have completely understood the above message. * * Detected file collision(s): * * /usr/bin/project * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * sci-chemistry/azara-2.7 * /usr/bin/project * * Package 'sci-geosciences/gmt-4.5.0-r2' NOT merged due to file * collisions. If necessary, refer to your elog messages for the whole * content of the above message.